Janemma. If the queen lays some brood frames in the honey supers, simply move those frames back down into the brood box, if they are bothering you there. If not, just leave them, the brood will hatch out in a couple of weeks and the bees will store nectar in the cells that the brood was in, no problems. Like others said, let the queen lay where she wants, if she is restricted, the possibility of swarming is worse than brood in the honey super. Have a great and wonderful day, Cindi